Tag: vep

All Skills Tools

Ensembl API for Variant and Gene Annotation

This tool interfaces with the Ensembl REST API to perform comprehensive genomic annotations, including variant consequence prediction (VEP), regulatory feature overlap, and coordinate liftover between assemblies. It also facilitates gene ID…

ammawla/encode-toolkit ensembl variant-annotation genomics liftover

skill ★ 34

Ensembl Genomic Annotation and VEP Skill

Query the Ensembl REST API to perform variant effect prediction (VEP), coordinate liftover between assemblies, and retrieve regulatory feature annotations. The skill also facilitates gene identifier resolution and phenotype association look…

ammawla/encode-toolkit ensembl vep genomics variant-annotation