Tag: scatac-seq

All Skills Tools

Analyzing ENCODE single-cell genomics data

This skill guides the retrieval and analysis of single-cell genomics data (scRNA-seq and scATAC-seq) from the ENCODE project. It provides detailed protocols for data structure, quality assessment, and integrating single-cell profiles with b…

ammawla/encode-toolkit single-cell genomics encode scrna-seq

skill ★ 34

ENCODE Single-Cell Genomics Data Analysis Guide

This skill guides the retrieval and analysis of single-cell genomics data (scRNA-seq and scATAC-seq) from ENCODE. It covers data structure, quality control metrics, and best practices for integrating single-cell profiles with bulk epigenomi…

ammawla/encode-toolkit single-cell encode genomics scrna-seq